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vg
tools for working with variation graphs
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This is the complete list of members for vg::RecombinatorHaplotype, including all inherited members.
| connect(gbwt::node_type until, const gbwtgraph::GBWTGraph &graph) | vg::RecombinatorHaplotype | private |
| contig_name | vg::RecombinatorHaplotype | |
| extend(sequence_type sequence, const Haplotypes::Subchain &subchain, const Recombinator &recombinator, gbwt::GBWTBuilder &builder, gbwtgraph::MetadataBuilder &metadata) | vg::RecombinatorHaplotype | |
| finish(const Recombinator &recombinator, gbwt::GBWTBuilder &builder, gbwtgraph::MetadataBuilder &metadata) | vg::RecombinatorHaplotype | |
| fragment | vg::RecombinatorHaplotype | |
| id | vg::RecombinatorHaplotype | |
| insert(gbwt::GBWTBuilder &builder, gbwtgraph::MetadataBuilder &metadata) | vg::RecombinatorHaplotype | private |
| path | vg::RecombinatorHaplotype | |
| position | vg::RecombinatorHaplotype | |
| prefix(gbwt::size_type sequence_id, gbwt::node_type until, const gbwt::GBWT &index) | vg::RecombinatorHaplotype | private |
| sequence_id | vg::RecombinatorHaplotype | |
| sequence_type typedef | vg::RecombinatorHaplotype | |
| suffix(const gbwt::GBWT &index) | vg::RecombinatorHaplotype | private |
| take(gbwt::size_type sequence_id, const Recombinator &recombinator, gbwt::GBWTBuilder &builder, gbwtgraph::MetadataBuilder &metadata) | vg::RecombinatorHaplotype |
1.9.8